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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC08G07010.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
WOX |
Protein Properties |
Length: 398aa MW: 42809.6 Da PI: 9.0514 |
Description |
WOX family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC08G07010.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 47.8 | 2.4e-15 | 37 | 97 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
r+R+++++eq+ +Le+ F++ +p ++e +++ + l + +++V++WFqNrR + ++
OPUNC08G07010.1 37 RSRWAPKPEQILILESIFNSgMVNPAKDETARIRRLLerfgAVRDANVFYWFQNRRSRSRR 97
89*****************99*************************************997 PP
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2 | Homeobox | 47.8 | 2.4e-15 | 163 | 223 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
r+R+++++eq+ +Le+ F++ +p ++e +++ + l + +++V++WFqNrR + ++
OPUNC08G07010.1 163 RSRWAPKPEQILILESIFNSgMVNPAKDETARIRRLLerfgAVRDANVFYWFQNRRSRSRR 223
89*****************99*************************************997 PP
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3 | Wus_type_Homeobox | 103.9 | 1e-33 | 36 | 98 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
ar+RW+P+peQi iLe++++sG+++P+k+e+ ri++ Le++G+++d+NVfyWFQNr++R+r++
OPUNC08G07010.1 36 ARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQNRRSRSRRR 98
689**********************************************************98 PP
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4 | Wus_type_Homeobox | 103.9 | 1e-33 | 162 | 224 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
ar+RW+P+peQi iLe++++sG+++P+k+e+ ri++ Le++G+++d+NVfyWFQNr++R+r++
OPUNC08G07010.1 162 ARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQNRRSRSRRR 224
689**********************************************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 398 aa
Download sequence Send
to blast |
MDRTASWEVV SRRGELQAPA SHGGGHGHRG GEGEPARSRW APKPEQILIL ESIFNSGMVN 60 PAKDETARIR RLLERFGAVR DANVFYWFQN RRSRSRRRAR QLQQACGAAL HQLPSAAAAA 120 GGGGGGYYHH HHHDVVSRRG ELQAPASHGG GHGHRGGEGE PARSRWAPKP EQILILESIF 180 NSGMVNPAKD ETARIRRLLE RFGAVRDANV FYWFQNRRSR SRRRARQLQQ ACGAIGHHHV 240 HSSSPFLMHG GGGGGGVASA MTVPVAAAAA AASAHFLADD VDAGGDDDLF AISRQMGLMA 300 RGGGGGGGDH HYSSYADSDT TQLSYHHQPT GTTIQVFING VAYDVPSGGA LDMAGTFGRD 360 AMLVHSSGEV LPVDEHGVLI NSLQMGECYY LVGELINY
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP005249 | 1e-145 | AP005249.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, BAC clone:OSJNBa0087F21. |
GenBank | AP014964 | 1e-145 | AP014964.1 Oryza sativa Japonica Group DNA, chromosome 8, cultivar: Nipponbare, complete sequence. |
GenBank | CP012616 | 1e-145 | CP012616.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 8 sequence. |