 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC07G24890.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 333aa MW: 34910.6 Da PI: 6.9882 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC07G24890.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 75.1 | 8.4e-24 | 121 | 182 | 2 | 59 |
--SS-EEEEEEE--TT-S.S-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgse.fprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
+Dg +WrKYGqK++++s+ +prsYYrCt++ gC+++k+v+ s+++p+ ++i Y geH+++
OPUNC07G24890.1 121 EDGKQWRKYGQKHIQDSPnNPRSYYRCTHRpdqGCMATKQVQASESNPSEFVINYYGEHTCR 182
89**************9736*********9999**************************996 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 333 aa
Download sequence Send
to blast |
MASPGGGVGD GSGSPATEPH EVIDDLLEAR KQAVMLHNML QGTSSSSCVA ASTRQLNQLI 60
DGVMSRLQSS SLSPGGGGRR GSGGRKKKSA TAVAGPHRRS SSGRRRSKSP FVKTVTTKEL 120
EDGKQWRKYG QKHIQDSPNN PRSYYRCTHR PDQGCMATKQ VQASESNPSE FVINYYGEHT 180
CRDPSTIPFV VEAEAPIADY ANLISFGSSA VASTSRDPLR QSHHRLMAEA VDTTPSCSFA 240
NCHSPLSPEC ASEAAALSSS LPLSTVVGSA VTTPSTSIVG SAPAEYDWPS GLAGGDMASS 300
FPSSPSSLGF MTGSLGSFGN LPGDDDDMFG FDP
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK110900 | 0.0 | AK110900.1 Oryza sativa Japonica Group cDNA clone:002-173-B01, full insert sequence. |
