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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC07G18550.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 309aa MW: 32907.6 Da PI: 7.4641 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC07G18550.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 54.8 | 2.4e-17 | 47 | 97 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s++ GVr+++ +grWvAeI+d + ++ r +lg+f ta+ Aa+a+++a++ l+g
OPUNC07G18550.1 47 SKFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETADAAARAYDEAARLLRG 97
79********.7*********32...35***********************9998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 309 aa
Download sequence Send
to blast |
MELNFQVQPP VFQLQDYCYY YSQEAAAAPA AKPTKPRGRK KGSTSHSKFV GVRQRPSGRW 60 VAEIKDTTQK IRMWLGTFET ADAAARAYDE AARLLRGAEA RTNFAPRISP DCPLAVRIRG 120 LLHHKKLKKA RSAAAATASS SGAASKKRST AAAVATPTIT TTSNSNSDGA DSACGGSSSS 180 SSTDSCDGAV KQGGGGGAPT DVSEVYRPDF GHAGAEEFDS WMFDTAFGQF PALDSFAAVD 240 AVTHPPATAS PEESSAGTPP AEMAEFERIK VERRISASLY AMNGLQEYFD KVFDASACDP 300 FWDLSPLCH
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP003758 | 0.0 | AP003758.4 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1562_B11. |
GenBank | AP003845 | 0.0 | AP003845.3 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1699_E05. |
GenBank | AP014963 | 0.0 | AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence. |