 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OPUNC07G17890.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
NAC |
| Protein Properties |
Length: 431aa MW: 45701.1 Da PI: 8.0168 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC07G17890.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 174.4 | 3.3e-54 | 31 | 159 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94
lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++++
OPUNC07G17890.1 31 LPPGFRFHPTDEELVVHYLKKKAASVPLPV-TIIAEVDLYKFDPWELPEKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMA 123
79****************************.89***************999999**************************************** PP
NAM 95 k..kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ ++e+vg+kk Lvfy+g+ pkg+kt+W+mheyrl
OPUNC07G17890.1 124 SgsSREKVGVKKALVFYRGKPPKGVKTNWIMHEYRL 159
9777788***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 431 aa
Download sequence Send
to blast |
MESPDSSSGS APPRVMRGRQ QQQKPGSAPE LPPGFRFHPT DEELVVHYLK KKAASVPLPV 60
TIIAEVDLYK FDPWELPEKA SFGEQEWYFF SPRDRKYPNG ARPNRAATSG YWKATGTDKP 120
IMASGSSREK VGVKKALVFY RGKPPKGVKT NWIMHEYRLT DTSSSAAAAV APTRRPPPPI 180
TSGSRGAVSL RLDDWVLCRI YKKTNKAGAG QRSMECEDSV EDALTGYAPS QQHGTAAAGM 240
AGSDGAGGVA THGGNYSSLL HHDSHEDNFL VNGLLTAEDA AGLSTGASSL SQLAAAARAV 300
ATPCDATKQL LAPSPTPFNW FEAFLPRAKE FPGGLNRSSR DIGDMSLSST VDRSLSEAGA 360
VAIDTGDAAN GANTMTAFIN PLGVQGATYQ QHHAIMGASL PSESAAAAAA AAAAACNFQH 420
PYQLSRVNWD P
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-73 | 21 | 207 | 7 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-73 | 21 | 207 | 7 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-73 | 21 | 207 | 7 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-73 | 21 | 207 | 7 | 169 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-73 | 21 | 207 | 10 | 172 | NAC domain-containing protein 19 |
| 3swm_B | 1e-73 | 21 | 207 | 10 | 172 | NAC domain-containing protein 19 |
| 3swm_C | 1e-73 | 21 | 207 | 10 | 172 | NAC domain-containing protein 19 |
| 3swm_D | 1e-73 | 21 | 207 | 10 | 172 | NAC domain-containing protein 19 |
| 3swp_A | 1e-73 | 21 | 207 | 10 | 172 | NAC domain-containing protein 19 |
| 3swp_B | 1e-73 | 21 | 207 | 10 | 172 | NAC domain-containing protein 19 |
| 3swp_C | 1e-73 | 21 | 207 | 10 | 172 | NAC domain-containing protein 19 |
| 3swp_D | 1e-73 | 21 | 207 | 10 | 172 | NAC domain-containing protein 19 |
| 4dul_A | 1e-73 | 21 | 207 | 7 | 169 | NAC domain-containing protein 19 |
| 4dul_B | 1e-73 | 21 | 207 | 7 | 169 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor of the NAC family associated with male fertility. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK063406 | 0.0 | AK063406.1 Oryza sativa Japonica Group cDNA clone:001-115-A08, full insert sequence. |
