PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC07G13630.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family CAMTA
Protein Properties Length: 915aa    MW: 102304 Da    PI: 7.6146
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC07G13630.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1166.73.6e-52311463117
             CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 
                       e  +rw +++ei+aiL+n++++++++++ ++p sg+++Ly+rk+vr+frkDG++wkkkkdg+tv+E+hekLK+g+ e +++yYa++e++p+f 
  OPUNC07G13630.1  31 AEaAARWFRPNEIYAILANHARFKIHAQPVDKPVSGTVVLYDRKVVRNFRKDGHNWKKKKDGRTVQEAHEKLKIGNEERVHVYYARGEDDPNFF 124
                      45589***************************************************************************************** PP

             CG-1  96 rrcywlLeeelekivlvhylev 117
                      rrcywlL+++le+ivlvhy+++
  OPUNC07G13630.1 125 RRCYWLLDKDLERIVLVHYRQT 146
                      *******************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143774.85826152IPR005559CG-1 DNA-binding domain
SMARTSM010762.9E-6329147IPR005559CG-1 DNA-binding domain
PfamPF038594.0E-4533145IPR005559CG-1 DNA-binding domain
SuperFamilySSF812964.48E-10375461IPR014756Immunoglobulin E-set
SuperFamilySSF484031.26E-13556662IPR020683Ankyrin repeat-containing domain
CDDcd002041.44E-11560656No hitNo description
Gene3DG3DSA:1.25.40.206.4E-14577662IPR020683Ankyrin repeat-containing domain
PfamPF127969.9E-7585660IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029714.902588668IPR020683Ankyrin repeat-containing domain
SMARTSM002486.4E-6597626IPR002110Ankyrin repeat
PROSITE profilePS5008811.781597629IPR002110Ankyrin repeat
SMARTSM00248580636665IPR002110Ankyrin repeat
SuperFamilySSF525407.97E-9713814IPR027417P-loop containing nucleoside triphosphate hydrolase
PROSITE profilePS500966.54748774IPR000048IQ motif, EF-hand binding site
SMARTSM000151.5763785IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.785764791IPR000048IQ motif, EF-hand binding site
PfamPF006120.002766784IPR000048IQ motif, EF-hand binding site
SMARTSM000150.016786808IPR000048IQ motif, EF-hand binding site
PROSITE profilePS5009610.274787811IPR000048IQ motif, EF-hand binding site
PfamPF006120.0091789808IPR000048IQ motif, EF-hand binding site
SMARTSM000152.4869891IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.084871899IPR000048IQ motif, EF-hand binding site
PfamPF006120.043872891IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 915 aa     Download sequence    Send to blast
MAGAGGWDPL VGSEIHGFLT YADLNYEKLV AEAAARWFRP NEIYAILANH ARFKIHAQPV  60
DKPVSGTVVL YDRKVVRNFR KDGHNWKKKK DGRTVQEAHE KLKIGNEERV HVYYARGEDD  120
PNFFRRCYWL LDKDLERIVL VHYRQTAEEN AMAPPNPEPE VADIPTVNLI HYTSPLTSAD  180
STSAHTELSM PEEINSHGGI SASSETGNHD SSLEEFWANL LESSIKNDPK IDTSACGGSF  240
ASSQQINNGL KNSGNIFNTS MASNAIPALN VVSETYATNH GLNQVNANHF GALKHQGDQT  300
QSLLMSDVDS QSDQFISSSV KSPMDGKTSV PNDVPARQNS LGLWKYLDDD SPGLGDNPNS  360
VPQNFHPVTN ERLLEINEIS PEWAYSTETT KVVVIGNFYE PYKHLTGSAM FGVFGDQCVA  420
GDIVQTGVYR FMVGPHTPGK VDFYLTLDGK TPISEICSFT YHVMHGSSLE GRLPPSEDDY  480
KRSNLQMQMR LARFLFATNK KKIAPKLLVE GTKVSNLMSA LPEKEWTDLW NILSDPGGTY  540
VPVTESLLEL VLRNRLQEWL VEMVMEGHKS TGRDDLGQGA IHLCSFLGFS LDFRDSSGWT  600
ALHWAAYHGR ERMVAALLSA GANPSLVTDP TPESPAGLTA ADLAARQGYD GLAAYLAEKG  660
LTAHFEAMSL SKDTEQSPSK TRLTKLQSEK FENLSEQELC LKESLAAYRN AADAASNIQA  720
ALRERTLKLQ TKAIQLANPE IEASEIVAAM KIQHAFRNYN RKKAMRAAAR IQSHFRTWKM  780
RRNFINMRRQ VIRIQAAYRG HQVRRQYRKV IWSVGIVEKA ILRWRKKRKG LRGIASGMPV  840
VMTLDAEAEP ASTAEEDFFQ AGRQQAEDRF NRSVVRVQAL FRSYKAQQEY RRMKIAHEEA  900
KIEFSEGQLG AACRS
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds calmodulin in a calcium-dependent manner in vitro. Binds to the DNA consensus sequence 5'-T[AC]CG[CT]GT[GT][GT][GT][GT]T[GT]CG-3'. {ECO:0000269|PubMed:16192280}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00435DAPTransfer from AT4G16150Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0709760.0AK070976.1 Oryza sativa Japonica Group cDNA clone:J023073E17, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015646432.10.0calmodulin-binding transcription activator CBT-like isoform X2
SwissprotQ7XHR20.0CBT_ORYSJ; Calmodulin-binding transcription activator CBT
TrEMBLA0A0E0LKT50.0A0A0E0LKT5_ORYPU; Uncharacterized protein
STRINGOPUNC07G13630.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP98312933
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16150.10.0calmodulin binding;transcription regulators