 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC07G12950.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 417aa MW: 45039.1 Da PI: 5.8149 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC07G12950.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 95.3 | 4.3e-30 | 155 | 211 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
dDgynWrKYGqK vkg e+p+sYY+Ct+ +C v+k+ve+sa d+++++i+Y+g+H+he
OPUNC07G12950.1 155 DDGYNWRKYGQKAVKGGEYPKSYYKCTHLNCLVRKNVEHSA-DGRIIQIIYRGQHTHE 211
8****************************************.***************8 PP
|
| 2 | WRKY | 103.3 | 1.3e-32 | 323 | 381 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gC vkk+vers e+p++v++tYeg+H h+
OPUNC07G12950.1 323 LDDGYRWRKYGQKVVKGNPYPRSYYKCTYLGCDVKKQVERSVEEPNAVITTYEGKHIHD 381
59*******************************************************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 417 aa
Download sequence Send
to blast |
MAGGGSLWVP PPPSSSSSEG GFPELPVAAV EGLLDAPFPS SGGGGGGWPP LSGTAVLLGY 60
PQGNFQIFPE QDLVPLTAQD VHSKCITLGR AENPSFIPLV TSALVSQHTG SSSVNVTPLQ 120
EILTLPSQIS NVNTESIGVL QGLPASSIVL DRPADDGYNW RKYGQKAVKG GEYPKSYYKC 180
THLNCLVRKN VEHSADGRII QIIYRGQHTH ERPSKRRFKD CGGISDDLDD FSGTTGTSVR 240
SQPDYDDYCR KPIIPSGTMV GPLVKKIEDG DDQFSGSSDN QDEHDDEVRT ADGASGDASA 300
NERNVPAPGQ KIIVSTTSEV DLLDDGYRWR KYGQKVVKGN PYPRSYYKCT YLGCDVKKQV 360
ERSVEEPNAV ITTYEGKHIH DVPAARNKSH VVANASLLQN TKSNTYCTEQ AYTTITC
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AY341847 | 0.0 | AY341847.1 Oryza sativa (japonica cultivar-group) WRKY6 mRNA, complete cds. |
