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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC07G10310.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 238aa MW: 25283 Da PI: 10.0201 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC07G10310.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 54 | 4.3e-17 | 76 | 125 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ GVr+++ +gr++AeIrd + ng +r+++g+f++ae Aa a+++a+++ +g
OPUNC07G10310.1 76 FIGVRRRP-WGRFAAEIRDSTRNG--ARVWIGTFDSAEAAAMAYDQAALSARG 125
57******.**********44465..***********************9998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 238 aa
Download sequence Send
to blast |
MAEHLSHAGM YIGYTADAAA SSSSSSSSSS SSSSEMLRFD TGWPDETPAP SAVAGRRRGA 60 GGDHRQGRGE RKAEAFIGVR RRPWGRFAAE IRDSTRNGAR VWIGTFDSAE AAAMAYDQAA 120 LSARGAAAAL NFPVERVRES LHALSLGAAG EGSPVLALKR RHSKRKRRKK AELLAAAATA 180 AAANATPQTR RISKSTELTS ATADEQKRFV VELEDLGAEY LEELLWLSEF NGGSGTAD
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 159 | 165 | RRHSKRK |
2 | 163 | 168 | KRKRRK |
3 | 163 | 169 | KRKRRKK |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK062612 | 0.0 | AK062612.1 Oryza sativa Japonica Group cDNA clone:001-105-A10, full insert sequence. |
GenBank | AP005325 | 0.0 | AP005325.5 Oryza sativa Japonica Group genomic DNA, chromosome 7, PAC clone:P0710F09. |
GenBank | AP014963 | 0.0 | AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence. |
GenBank | CP012615 | 0.0 | CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence. |