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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC07G09790.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 268aa MW: 28935 Da PI: 8.5635 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC07G09790.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 40.2 | 8.3e-13 | 49 | 97 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
+++ Vr + +gr++AeI+dp k++r++lg++++ae+Aa+a++ a ++l+
OPUNC07G09790.1 49 RFHRVRKLP-WGRYAAEICDPA---KKARVWLGTYDSAEDAAQAYDVATRALR 97
567799999.**********83...36*******************9988876 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MRVRVAGEGG GDDGCSSGGE VGGRLGEIAL RPVGSGKGNY STDLGRVTRF HRVRKLPWGR 60 YAAEICDPAK KARVWLGTYD SAEDAAQAYD VATRALRPRP TSRSPSPTPS LSSITIRPTP 120 PPSPDRPPAA LASPLSRSAP GRDRCSRHGS HRRRSLTVIA TVCESSASVV EDNCTDTTAF 180 AVVLIPFQFD LNLPPGGVSV RGDEELKLTA LRLEHIRSLE KEEKEKNIWF FPSLVADMIP 240 PPILCCSCLL DLVTINVARS AYLPACCW
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP004046 | 1e-54 | AP004046.2 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1145_F01. |
GenBank | AP005849 | 1e-54 | AP005849.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09. |
GenBank | AP014958 | 1e-54 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |
GenBank | CP012610 | 1e-54 | CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence. |