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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC07G06390.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 284aa MW: 30759.3 Da PI: 8.216 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC07G06390.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.1 | 2.2e-18 | 39 | 89 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s++ GVr+++ +grWvAeI+d + ++ r +lg+f taeeAa+a+++a+ l+g
OPUNC07G06390.1 39 SKFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAAQAYDEAACLLRG 89
79********.7*********32...35**********************99987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0000302 | Biological Process | response to reactive oxygen species |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009723 | Biological Process | response to ethylene |
GO:0035865 | Biological Process | cellular response to potassium ion |
GO:0048528 | Biological Process | post-embryonic root development |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 284 aa
Download sequence Send
to blast |
MELQFQKPTQ GQAQQQQQCH YQAPTTTVAK NKARSKCSSK FVGVRQRPSG RWVAEIKDTT 60 QKIRMWLGTF ETAEEAAQAY DEAACLLRGS NTRTNFATHA APDSPLASRI RTLLTHKKLK 120 KSMPQPTITF STAVYRHAGS TIPTTTAATS TSTITTTTSG VSSSRSNSSS LNFTMSGSGL 180 HATNLSNFAI SGSEELQLAS QHYDQSWALN TSVPLGDGCD MAGSNACPVA SDQDKMKTEK 240 QGPPSSHGMN GVQEQETFDM GNDLCDSLWD LPPICQLSCK SLMY
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP004273 | 1e-177 | AP004273.2 Oryza sativa Japonica Group genomic DNA, chromosome 7, PAC clone:P0431A02. |
GenBank | AP014963 | 1e-177 | AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence. |
GenBank | CP012615 | 1e-177 | CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence. |