PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC07G03360.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family C2H2
Protein Properties Length: 170aa    MW: 17901.9 Da    PI: 6.3417
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC07G03360.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.70.00083759123
                     EEETTTTEEESSHHHHHHHHHHT CS
          zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                     ++C  C+++F  +  L  H++ H
  OPUNC07G03360.1 37 FPCLFCDRTFVKSQALGGHQNAH 59
                     89*****************9988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.26E-53564No hitNo description
PROSITE profilePS5015710.7623764IPR007087Zinc finger, C2H2
PROSITE patternPS0002803959IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MVVNVSLSLA APAARNRDED CAAAPTARVD GKEVRLFPCL FCDRTFVKSQ ALGGHQNAHR  60
KERVAAGWNP YVYYYAAGAP SLSSSSEVTD NLAAARSIPI SSHGCSVGPQ WWSGGGGGGE  120
HAQLLAALGS AGRDDNSVDM PNYRIRASHA ATEISSMGAG DEQLDLELRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015646457.19e-31zinc finger protein GIS3
TrEMBLA0A0E0LH951e-121A0A0E0LH95_ORYPU; Uncharacterized protein
STRINGOPUNC07G03360.11e-122(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP384714
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14010.13e-12C2H2 family protein