PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC06G25510.1

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 273aa MW: 30980.3 Da PI: 9.2324

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC06G25510.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	146.7	1.2e-45	6	136	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkya...tgkrknratksgyWkatgkdkev 92 pGfrFhPt+eel+ +yLk+ v+gkkl++ ++i++v++y+++P++Lp ++ +e+ewyfF++rd+k+a g r++r+t++g+Wkatg+d++v OPUNC06G25510.1 6 LPGFRFHPTEEELLEFYLKQVVQGKKLKF-DIIPTVQLYRHDPRELPGLARIGEREWYFFVPRDRKQAagaGGGRPSRTTERGFWKATGSDRAV 98 59************************9.99***********8778899*********9443466****************** PP NAM 93 lsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ ++l+g kktLv+y+grap+g+ktdWvm+eyrl OPUNC06G25510.1 99 RCAadPKRLIGRKKTLVYYEGRAPRGTKTDWVMNEYRL 136 98777788**************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	8.11E-53	4	161	IPR003441	NAC domain
PROSITE profile	PS51005	52.599	5	161	IPR003441	NAC domain
Pfam	PF02365	2.8E-24	7	136	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence Send to blast
MEVEQLPGFR FHPTEEELLE FYLKQVVQGK KLKFDIIPTV QLYRHDPREL PGLARIGERE 60 WYFFVPRDRK QAAGAGGGRP SRTTERGFWK ATGSDRAVRC AADPKRLIGR KKTLVYYEGR 120 APRGTKTDWV MNEYRLPDAA AAAIPMQKQH DDMVLCKVYR KAVSLKELEQ RVAMEELARS 180 STTTSSNNTG SPLQDSSSIS ISSSSDAMKK EVVLVDEAAA AHELLRPATL SLPQLEVARP 240 QSGLEWMQEP FLTQLRSPWM ESWSPYYASV LNF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	7e-44	2	161	12	168	Stress-induced transcription factor NAC1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	CP012614	0.0	CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence.
GenBank	CU406703	0.0	CU406703.1 Oryza rufipogon (W1943) cDNA clone: ORW1943C111K18, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015643570.1	1e-170	NAC domain-containing protein 22-like
Swissprot	Q10S65	1e-101	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A0E0LFU6	0.0	A0A0E0LFU6_ORYPU; Uncharacterized protein
STRING	OPUNC06G25510.1	0.0	(Oryza punctata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1770	38	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	2e-78	NAC domain containing protein 36

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]