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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
OPUNC06G21660.1 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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| Family |
G2-like |
| Protein Properties |
Length: 347aa MW: 37848.7 Da PI: 9.4777 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC06G21660.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 106.2 | 1.9e-33 | 54 | 108 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprlrWt eLH+rFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl
OPUNC06G21660.1 54 KPRLRWTVELHDRFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 108
79****************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 347 aa
Download sequence Send
to blast |
MFPSSSPSPS SSSKKQQQQQ QLSGGGGGAA ASSNDRPPLC VQGDSGLVLT TDPKPRLRWT 60
VELHDRFVDA VTQLGGPDKA TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QHKDFNDHSV 120
KDAMDMQRNA ASSSSGIMGR SMNDRSVHVN EALRMKMEVQ RRFHEQLEVQ KHLQMRVEAQ 180
GKYMQSILEK AYQAISSGDC ATWHAGYKSL GNQAVLDIGS SMSFPSLQDL QLYGGSHLDL 240
HQQQMERSPM DSFLAFNYSS TGKSPVVWPG ADDGEPAKIS GDQLQMAAPS MMMDATTMSG 300
GDSMGSKGFE GQMSSKLDMR SPPQQQTGSE RMSSPIVGAK ARNISYG
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 2e-18 | 54 | 110 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 2e-18 | 54 | 110 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 2e-18 | 54 | 110 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 2e-18 | 54 | 110 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor required for phloem identity. Has a dual role both in promoting phloem differentiation and in repressing xylem differentiation during vascular development. Regulates the expression of the transcription factor NAC045 (AC A4VCM0). May activate the transcription of specific genes involved in phosphate uptake or assimilation (PubMed:15592750). Promotes flowering through transcriptional activation of both FT and its transport machinery component, FTIP1 (PubMed:26239308). {ECO:0000269|PubMed:14614507, ECO:0000269|PubMed:18523061, ECO:0000269|PubMed:25081480, ECO:0000269|PubMed:26239308, ECO:0000305|PubMed:15592750}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by phosphate deficiency. {ECO:0000269|PubMed:15592750}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK119588 | 0.0 | AK119588.1 Oryza sativa Japonica Group cDNA clone:002-117-C12, full insert sequence. |
| Publications
? help Back to Top |
- Martínez-Navarro AC,Galván-Gordillo SV,Xoconostle-Cázares B,Ruiz-Medrano R
Vascular gene expression: a hypothesis.
Front Plant Sci, 2013. 4: p. 261
[PMID:23882276] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Kondo Y, et al.
Vascular Cell Induction Culture System Using Arabidopsis Leaves (VISUAL) Reveals the Sequential Differentiation of Sieve Element-Like Cells.
Plant Cell, 2016. 28(6): p. 1250-62
[PMID:27194709] - Shibuta M,Abe M
FE Controls the Transcription of Downstream Flowering Regulators Through Two Distinct Mechanisms in Leaf Phloem Companion Cells.
Plant Cell Physiol., 2017. 58(11): p. 2017-2025
[PMID:29036620]
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