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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OPUNC06G21410.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 292aa MW: 31495.2 Da PI: 7.8541 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 54.2 | 3e-17 | 130 | 183 | 3 | 56 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 e kr rr+ +NRe+ArrsR+RK+a++ eLe v++L+aeN++L k+l e +++ OPUNC06G21410.1 130 ETKRIRRMVSNRESARRSRRRKQAQLSELESQVEQLKAENSSLFKQLTESSQQF 183 68******************************************8888877765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.0E-17 | 128 | 192 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.656 | 130 | 184 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 9.0E-15 | 130 | 182 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.09E-12 | 132 | 183 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.6E-13 | 132 | 183 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 135 | 150 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence Send to blast |
MMKKCASELQ LEAFIREEAG DRKLRGGGGA EGGGAGVFSP GDGEMSVFDQ NTLDGSGGGH 60 QLWWPESVRT PPRAAAFSAT VDSRTPASIS DGPKPTTSAN HAPESDSDSD SDSLLEAERS 120 PSMRGTRSTE TKRIRRMVSN RESARRSRRR KQAQLSELES QVEQLKAENS SLFKQLTESS 180 QQFNTAVTDN RILKSDVEAL RVKVKMAEDM VARAAMSCGL GQLGLAPLLS SRKMCQALDM 240 LSLPRNDACF KGLSLNPGRQ VKNSPVQSAA SLESLDNRIS SEVTSCSADV WP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 144 | 151 | RRSRRRKQ |
2 | 146 | 151 | SRRRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters (PubMed:11133985). May function as a negative regulator in cold and drought stress responses (PubMed:22189955). {ECO:0000269|PubMed:11133985, ECO:0000269|PubMed:22189955}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by cold stress in roots. {ECO:0000269|PubMed:22189955}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CT832853 | 0.0 | CT832853.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA113E18, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015643805.1 | 1e-160 | bZIP transcription factor RISBZ5 | ||||
Swissprot | Q654B3 | 1e-161 | RSBZ5_ORYSJ; bZIP transcription factor RISBZ5 | ||||
TrEMBL | A0A0E0LEC0 | 0.0 | A0A0E0LEC0_ORYPU; Uncharacterized protein | ||||
STRING | OPUNC06G21410.1 | 0.0 | (Oryza punctata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2095 | 37 | 96 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24800.1 | 3e-29 | basic leucine zipper 9 |
Publications ? help Back to Top | |||
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