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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC06G19820.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 359aa MW: 37736.9 Da PI: 6.5493 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC06G19820.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 41.9 | 2.5e-13 | 75 | 129 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkklege 56
++y+G r ++ +g+++AeIr + ++ r++lg+f taeeAa a++ a+ ++ge
OPUNC06G19820.1 75 KKYRGARKRP-WGKYAAEIRIR---NtmgVKERVWLGTFVTAEEAAWAYDTAAMVIHGE 129
59********.**********5...445588**********************999986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 359 aa
Download sequence Send
to blast |
MGRPVKTTTT WLVELLREYC QRAAAQATAN GAAAAVEGEI NTEGLAALAA EAAAVEGEEG 60 LAVEPPVAVA AGGEKKYRGA RKRPWGKYAA EIRIRNTMGV KERVWLGTFV TAEEAAWAYD 120 TAAMVIHGEA ATTNFPRAPL PPPTTPMMRS MLVFFGFAHL VRSLVPRARG GAGGRRRSRR 180 AAAAAAPPPA APVSEAPPPL SAALVPEPGS EPELQVQGGG ERGRPGRGRD GRGRGRGRGR 240 TPARVADEDT PMLEVATPAA APAPAPELAP APANHSIFQP MIIPPGGGVV APEFLPAISD 300 DEPVLLRKKP KLLGFYTPPD SPEQFIMEFF ADIGEDDVPS SSLWQDPAGN GEVHSKQPE
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 226 | 236 | RGRDGRGRGRG |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012614 | 1e-124 | CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence. |