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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC06G13180.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
G2-like |
Protein Properties |
Length: 455aa MW: 48620.7 Da PI: 4.705 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC06G13180.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 87.7 | 1.1e-27 | 180 | 234 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k++++WtpeLH+rFv+aveqL G++kA+P++ile+m++++Lt+++++SHLQkYR++
OPUNC06G13180.1 180 KAKVDWTPELHRRFVQAVEQL-GIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSH 234
6799*****************.********************************86 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0007165 | Biological Process | signal transduction |
GO:0009658 | Biological Process | chloroplast organization |
GO:0009910 | Biological Process | negative regulation of flower development |
GO:0010380 | Biological Process | regulation of chlorophyll biosynthetic process |
GO:0010638 | Biological Process | positive regulation of organelle organization |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:1900056 | Biological Process | negative regulation of leaf senescence |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 455 aa
Download sequence Send
to blast |
MLAVSPALCP DIEERAGVAG DAGMEVVGMS SDMEFDFSVD DIDFGDFFLR LEDGDVLPDL 60 EVDPAEIFTD FEAIATSGGE GVQDQEVPTV ELLAPTEDVG VVDPCGDVVG EENAAFSEAG 120 EEKGGCNHDE DAAEANADDG ADGAAAAEAK SSSPSSTTSS SQEAESRHKS SSKSSQGKKK 180 AKVDWTPELH RRFVQAVEQL GIDKAVPSRI LEIMGIDSLT RHNIASHLQK YRSHRKHMIA 240 REVEAASWTQ RRQIYAAGGG AVAKRPESNV WAVPTIGFPP PPPPPHPAPI QHFGRPLHVW 300 GHPTMDSSRV PMWPPRHLVP RGPAPPWVPP PPSPSDPAFW HHPYMRGPGH VPTQGTPCMA 360 MPMPAARFPA PPVPGLVPCP MYRPLTPQAL ASKNQQDAQL QLQVQPTSES IDAAIGDVLS 420 KPWLPLPLGL KPPSVDSVMG ELQRQGVANV PPACG
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcriptional activator that promotes chloroplast development. Acts as an activator of nuclear photosynthetic genes involved in chlorophyll biosynthesis, light harvesting, and electron transport. {ECO:0000269|PubMed:19808806}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By light. {ECO:0000269|PubMed:11340194}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK061946 | 0.0 | AK061946.1 Oryza sativa Japonica Group cDNA clone:001-042-E04, full insert sequence. |
GenBank | AK065184 | 0.0 | AK065184.1 Oryza sativa Japonica Group cDNA clone:J013002D22, full insert sequence. |
GenBank | AK098909 | 0.0 | AK098909.1 Oryza sativa Japonica Group cDNA clone:J013002F22, full insert sequence. |
GenBank | AK122161 | 0.0 | AK122161.1 Oryza sativa Japonica Group cDNA clone:J033147G01, full insert sequence. |