 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC06G10540.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
Dof |
| Protein Properties |
Length: 290aa MW: 29490.7 Da PI: 6.8543 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC06G10540.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 122.4 | 1.6e-38 | 27 | 84 | 4 | 61 |
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
++++cprCds+ntkfCyynny+lsqPr+fCkaCrryWtkGG lrnvPvGgg+rk k+
OPUNC06G10540.1 27 EEVRCPRCDSSNTKFCYYNNYNLSQPRHFCKACRRYWTKGGLLRNVPVGGGCRKPKRP 84
6789**************************************************9986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 290 aa
Download sequence Send
to blast |
MQEFHPVPGL AGRLFGGAAA VAAPVVEEVR CPRCDSSNTK FCYYNNYNLS QPRHFCKACR 60
RYWTKGGLLR NVPVGGGCRK PKRPASSSSV TDVHRAGHGG GCGHRDAKSA RSAGGEGSSA 120
SASATGTTPA VAPASNTLSA AVTQPSSVAT FVAADDALSP PPAPMFADQA TALASLFAPP 180
PPPPPPSQAL PAFTSFSAQP KAEEDVADAP ALAATEQQPS SAASFTAHNI SPPFTARSSD 240
GPAAAAAADW APPTAVLEAG MFDLAGAIGG DTSYWNAASW TDHDGTIYLP
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP004791 | 1e-129 | AP004791.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0491D10. |
| GenBank | AP014962 | 1e-129 | AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence. |
