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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC06G06600.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 214aa MW: 22191.9 Da PI: 4.4016 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC06G06600.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 55.1 | 1.9e-17 | 26 | 74 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
ykGVr ++ +g+Wv+eIr ps+ ++r++lg++ tae Aa+a++aa ++l+g
OPUNC06G06600.1 26 YKGVRMRS-WGSWVSEIRAPSQ---KTRIWLGSYSTAEAAARAYDAALLCLKG 74
9****998.**********964...6************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 214 aa
Download sequence Send
to blast |
MVKTAAASNG AAAARHGGGG GKRAAYKGVR MRSWGSWVSE IRAPSQKTRI WLGSYSTAEA 60 AARAYDAALL CLKGSAAADL NFPVRLPFDL PAAAMSPKSI QRVAAAAAAN ASNAVVFAGV 120 DESASEASTP ACSSSNAASP SPVSSPETVI SDDVDYSLLA DIEAFFQSPK CMEYAMMDPC 180 SAFFAPPPAT MAMEEDCGWE EEGDIALWSF SSLD
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP004687 | 1e-152 | AP004687.2 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0021C04. |
GenBank | AP014962 | 1e-152 | AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence. |
GenBank | CP012614 | 1e-152 | CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence. |