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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC06G04240.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 188aa MW: 19847.2 Da PI: 11.0228 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC06G04240.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 53.7 | 5.1e-17 | 46 | 95 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr +k +g+WvAeIr+p +kr r++lg++ ta Aa+a++ a +l+g
OPUNC06G04240.1 46 QYRGVRMRK-WGKWVAEIREP---NKRSRIWLGSYSTAVAAARAYDTAVFYLRG 95
69*****99.**********9...336*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 188 aa
Download sequence Send
to blast |
MEREATVFLP PPPPQPPTQQ PAAAVTTTPA AVRGAGGGGR GGGGRQYRGV RMRKWGKWVA 60 EIREPNKRSR IWLGSYSTAV AAARAYDTAV FYLRGRSARL NFPDQLDGAA SAGGAGGGGA 120 EDHRELTAAA IRKKAAEVGA RVDAQHSVVG GVGSPVLLQP PQPPPPQRRR TKNPDLNREP 180 TPDTSDDE
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB023482 | 0.0 | AB023482.2 Oryza sativa Japonica Group genomic DNA, chromosome 6, clone P0680A03. |
GenBank | AK107775 | 0.0 | AK107775.1 Oryza sativa Japonica Group cDNA clone:002-133-B12, full insert sequence. |
GenBank | AP002536 | 0.0 | AP002536.2 Oryza sativa Japonica Group genomic DNA, chromosome 6, BAC clone:OSJNBa0015I14. |
GenBank | AP014962 | 0.0 | AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence. |