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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC06G03800.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 343aa MW: 36957 Da PI: 4.5918 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC06G03800.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.1 | 1.1e-18 | 116 | 166 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+++GVr ++ +g++ AeIrd k+ r++lg+f+taeeAa+ +++a+++l+g+
OPUNC06G03800.1 116 KFRGVRKRP-WGKYGAEIRDSQ---KNERVWLGTFDTAEEAARVYDHAALRLRGP 166
89*******.**********42...46**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 343 aa
Download sequence Send
to blast |
MVEVAVEKKV RKIVRGRCHV VASKDEPAAA AVAAPRVVRV ICRDHDATDS SGDDDGEDAP 60 RRASLLVHEI HVARQLAGES PAAPSSSQRR RIGPMKKRTD AAVDDATAAE VAPERKFRGV 120 RKRPWGKYGA EIRDSQKNER VWLGTFDTAE EAARVYDHAA LRLRGPSAMT NFPAPTPSPS 180 PPPLRATNAG AASGYDESSD ESQLVSSPVS VLRPMPAHAT AKKEAREEDD SAPDILSADD 240 MRGISAGENF SPFTGEILNF PPPDEDMFRG SISFGEPTPP PMVFDDDCMA RLGHIPNDDE 300 HPVTSSSFLD DELGDLPSWP EVDGFFSDVG GDDLFAAEPL PAL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012614 | 0.0 | CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence. |