 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC06G03640.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 382aa MW: 40856.9 Da PI: 6.0739 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC06G03640.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 89 | 3.9e-28 | 140 | 200 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
dDg++WrKYGqK++ g++fpr+YYrCt++ +Cp++k+v+rs+ d v+++tY+g H+++
OPUNC06G03640.1 140 DDGFSWRKYGQKDILGAKFPRGYYRCTYRnsqSCPATKQVQRSDADLAVFDVTYQGAHTCH 200
8***************************98889**************************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 382 aa
Download sequence Send
to blast |
MDGGDIHLLL SILADGEEQA RQLGEPAAAA DDEYHGGGRG EEYYRGVARQ LQCTFAKAMG 60
VARAIEAAAG AGGGASGSRG TTGDRSDSPR SADESSGRTA RDAVVAQQER HHDTIKRRKG 120
LPRWTEKFRV PDASLEATPD DGFSWRKYGQ KDILGAKFPR GYYRCTYRNS QSCPATKQVQ 180
RSDADLAVFD VTYQGAHTCH QRQRHAAATS PPAAGDQPPP QADPSVELLV NFKHGLKVET 240
NGLSPPPPPP PTNFHDGNDQ HFCFPSMPPF HAGVGPPPPP PDDALGGVCN NFSSPFVSPA 300
GSAAGESYFS MEHSYEPRGQ FVMSRGDSSE LHEVVSAAAS SAVVDPAAGG FDYPLYHGEV 360
DPHLPFPPLF GHASMYGQYR DA
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK241919 | 0.0 | AK241919.1 Oryza sativa Japonica Group cDNA, clone: J075074E04, full insert sequence. |
| GenBank | AK287985 | 0.0 | AK287985.1 Oryza sativa Japonica Group cDNA, clone: J075093G10, full insert sequence. |
| GenBank | AY676932 | 0.0 | AY676932.1 Oryza sativa (indica cultivar-group) transcription factor WRKY100 (WRKY100) mRNA, complete cds. |
