PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC06G00480.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family TALE
Protein Properties Length: 488aa    MW: 53780.2 Da    PI: 7.6399
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC06G00480.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox26.21.4e-082903271954
                      HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
         Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                      Fe   ++yp+  ++  LA+++gL+ +qV++WF N R +
  OPUNC06G00480.1 290 FEHflHPYPNDVDKHILARQTGLSRNQVSNWFINARVR 327
                      5544589*****************************88 PP
2BELL101.37e-33148216472
             BELL   4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                      +l+++ka++ls++eeVd+rY++y+eq+++v  sFeavag+g+a++Yt+lA++a+SrhFrcL+da+++q+
  OPUNC06G00480.1 148 DLERRKARILSMVEEVDRRYRRYREQMRAVEVSFEAVAGCGAAQVYTKLAMRAMSRHFRCLRDALVGQV 216
                      6899**************************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005743.3E-5778214IPR006563POX domain
PfamPF075267.6E-3984212IPR006563POX domain
PROSITE profilePS5007111.58268331IPR001356Homeobox domain
CDDcd000861.65E-11271332No hitNo description
SMARTSM003892.8E-8271335IPR001356Homeobox domain
SuperFamilySSF466897.27E-17272338IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.2E-27274337IPR009057Homeodomain-like
PfamPF059203.3E-17288327IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0009506Cellular Componentplasmodesma
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 488 aa     Download sequence    Send to blast
MMAAHHHLDF SSPPNATSFD HAAGLLSLHD VAAADHHIRG GGGGLQSPWS QQQQVSLSLY  60
NNAAGAGSPP SSLVAFAAAQ PFQLRGSKYL GPVKALLSEF CSLDVEAGDL LLHAMDGAKR  120
APKIGKWDDV EGSGSWGNLS LSSMDLLDLE RRKARILSMV EEVDRRYRRY REQMRAVEVS  180
FEAVAGCGAA QVYTKLAMRA MSRHFRCLRD ALVGQVRALR KAMGERDTAG GGVSAAPGAT  240
KGDTPRLRVL DQCLRQQRAF QQSGAVDNFP WRPQRGLPER AVAVLRSWLF EHFLHPYPND  300
VDKHILARQT GLSRNQVSNW FINARVRLWK PMIEDMYKEE TKPESSDNNI GNNKQQHRDD  360
DNKNYTATTV GQSSYRLHLR SSGNPNSSSF IPAAASTSID HHHHDGNHGQ LLGHSYSSAS  420
AAGLHHAGAV SLTLGLQQQQ QQQPFAASMM HQQQQSFMVE APVAEEEEDD VLPYRNLMDS  480
QLLHDFAG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A5e-15277334158Homeobox protein Meis1
4xrs_B5e-15277334158Homeobox protein Meis1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB2188950.0AB218895.1 Oryza sativa Japonica Group mRNA for OsBEL protein, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015641004.10.0homeobox protein BEL1 homolog
TrEMBLA0A0E0L6V60.0A0A0E0L6V6_ORYPU; Uncharacterized protein
STRINGOPUNC06G00480.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63983547
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.13e-90TALE family protein