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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC05G24070.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 276aa MW: 29976.7 Da PI: 9.8065 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC05G24070.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61 | 2.8e-19 | 97 | 147 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr++ +g+WvAeIr p + r r++lg+++++e Aa a+++a+ kl+ge
OPUNC05G24070.1 97 LYRGVRQRQ-WGKWVAEIRLPQN---RVRVWLGTYDSPETAAHAYDRAAFKLRGE 147
59****999.**********954...5**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 276 aa
Download sequence Send
to blast |
MDASLRTLPP ASFPGEVRSA VSSLLLSPGG SALDTVFSHL PPPVTIPPLG SSVYYRQSEL 60 LRHFAASQAA QSTAAASSSS AAAAGFPAAD DGAPRKLYRG VRQRQWGKWV AEIRLPQNRV 120 RVWLGTYDSP ETAAHAYDRA AFKLRGEYAR LNFPGVMDGR DCPDNLRQLR DAVDAKIQAI 180 RVRMARKRAR ARRQREESKK NQHAEDAKAA AAETPARPVV SERAASDTTT TTTTTSSSYG 240 SPDGVLSMSA ASVDGDCLLE RMPSFDPELI WEMLNF
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC104284 | 0.0 | AC104284.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OJ1735_C10, complete sequence. |
GenBank | AP014961 | 0.0 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |
GenBank | CT841687 | 0.0 | CT841687.1 Oryza rufipogon (W1943) cDNA clone: ORW1943C102K07, full insert sequence. |