 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC05G24020.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 309aa MW: 33702.8 Da PI: 6.3419 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC05G24020.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 81.8 | 7e-26 | 133 | 193 | 1 | 58 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58
ldDg +WrKYGqK++ g+++pr+Y+rCt++ gC+++k+v+r++ dp +++++Y g+H++
OPUNC05G24020.1 133 LDDGLSWRKYGQKDILGAKYPRAYFRCTHRhtqGCNATKQVQRADGDPLLFDVVYLGDHTC 193
58***************************98999*************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 309 aa
Download sequence Send
to blast |
MVELCGGEGE GQIMLASELA QLRAMARELE AKMDPDKVAA RELCRALASS VDRSIRLAVS 60
CFPPPEHSHH AAGNAGRDAA FKKRQVMIPG HGGFRVRRSP EQCSDMCSVR CRKGMAKVRR 120
QVRVTSVQDT ASLDDGLSWR KYGQKDILGA KYPRAYFRCT HRHTQGCNAT KQVQRADGDP 180
LLFDVVYLGD HTCGQAAAAA SQSAPPQLLP EHASQEQQSQ SSLLAAGTEG IHQQVVEPMA 240
AEAPFLFTST TATGVDDSYF SFISPANSDC QFSSDFSAGS VGVDMDHEAR FEDLFLNTPE 300
FFQSEIQNL
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK108389 | 0.0 | AK108389.1 Oryza sativa Japonica Group cDNA clone:002-142-F03, full insert sequence. |
