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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC05G19900.2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
CPP |
Protein Properties |
Length: 383aa MW: 42372.1 Da PI: 8.0638 |
Description |
CPP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC05G19900.2 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCR | 43.8 | 4.9e-14 | 83 | 120 | 3 | 40 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
+k+C Ckks+Clk+YC Cfa g +Cse+C C+ C+Nk
OPUNC05G19900.2 83 CKHCACKKSRCLKLYCPCFAGGGYCSEKCGCQPCFNKA 120
89**********************************85 PP
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2 | TCR | 49.9 | 6.2e-16 | 179 | 215 | 3 | 39 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39
++gCnCkks+ClkkYC+C+++g+ Cs C+CedC+N
OPUNC05G19900.2 179 RRGCNCKKSSCLKKYCDCYQDGTGCSLFCRCEDCRNP 215
589********************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 383 aa
Download sequence Send
to blast |
MEATPISVKP PSPVAAAPPP APVQVPVPPP PPPPPPAAAM EPLAPQPVAV VVAEAEPCSM 60 NQLALTPTPK RQKVEESADG NGCKHCACKK SRCLKLYCPC FAGGGYCSEK CGCQPCFNKA 120 LYAETVQTTR KVLLSRQKRM SLKINRRSEA NAEAVVVFLT EFAGATEDAH HSSSSTPPRR 180 GCNCKKSSCL KKYCDCYQDG TGCSLFCRCE DCRNPFGKNE GIMAEESKRF LYTGADLDHS 240 EDEHDFIVER SPRLQSPISK ESSFQQTPPH VRGTNRDTHM FPQAISQWQP RSWHCSKRQS 300 NDRVIDDSGE YKNSNHDWQL SKQEDSYSIS RCVQILNGMA ELSQVEKSVA PDVFLQAGNR 360 EIFISLNGDV RALWLKRKIQ NLT
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK108053 | 0.0 | AK108053.1 Oryza sativa Japonica Group cDNA clone:002-137-H05, full insert sequence. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G22760.1 | 2e-42 | Tesmin/TSO1-like CXC domain-containing protein |