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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
OPUNC05G17740.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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| Family |
WRKY |
| Protein Properties |
Length: 572aa MW: 59948.9 Da PI: 6.0078 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC05G17740.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 101.1 | 6.7e-32 | 220 | 277 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK++kgse+prsYY+Ct++gCp+kkkve+s d++v+ei+Y+g H h+k
OPUNC05G17740.1 220 DDGYNWRKYGQKQMKGSENPRSYYKCTFPGCPTKKKVEQSP-DGQVTEIVYKGAHSHPK 277
8****************************************.***************85 PP
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| 2 | WRKY | 106.5 | 1.4e-33 | 391 | 449 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+Ct+agCpv+k+ver+++d ++v++tYeg+Hnh+
OPUNC05G17740.1 391 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTAGCPVRKHVERASNDLRAVITTYEGKHNHD 449
59********************************************************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 572 aa
Download sequence Send
to blast |
MTAAPGSLPL VNSRPVALSL AASRSSFSSL LSGGSSLNLM MSPSSLPPAT ASSPSSYFGG 60
VSSSGFLDSP ILLTPSLFPS PTTTGALFSW MTTATATATA PESQVQGGVK DEQQQYSDFT 120
FLPTVSTAPA TMAGATSTTS TSFMQDSMLM APLGGDPYNG EQQQPWSYQE PTMDANTRPA 180
EFTSSAVTAA AGDVAGNGGY NQVAAPAAAG FRQQSRRSSD DGYNWRKYGQ KQMKGSENPR 240
SYYKCTFPGC PTKKKVEQSP DGQVTEIVYK GAHSHPKPPQ NGRGRGGSGG MYALHGGAAS 300
DAYSADALSG TPVATPENSS ASFGDDETNG VSSSLRVASN VGGGEDLDDD EPDSKRWRKD 360
GDGEGVSLVA GNRTVREPRV VVQTMSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTA 420
GCPVRKHVER ASNDLRAVIT TYEGKHNHDV PAARGSAAAL YRATPPQASN TMIPTTAQPS 480
SYLQGGGGGG YPVLPAGGYG AYGGVPPTTT QPVNGGGFAA LSGRFDDAMG GSYSYTSQQQ 540
QQPNDAVYYA SRAKDEPRDD GIMSFFEQPL LF
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator (PubMed:26025535). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:19199048, PubMed:26025535). Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA-induced promoters (PubMed:15618416, PubMed:19199048, PubMed:26025535). {ECO:0000269|PubMed:15618416, ECO:0000269|PubMed:19199048, ECO:0000269|PubMed:26025535}. |
| UniProt | Transcription repressor (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA-induced promoters (By similarity). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000250|UniProtKB:Q6QHD1}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by abscisic acid (ABA) in aleurone cells, embryos, roots and leaves (PubMed:15618416, PubMed:19199048). Slightly down-regulated by gibberellic acid (GA) (PubMed:15618416). Accumulates in response to jasmonic acid (MeJA) (By similarity). {ECO:0000250|UniProtKB:Q6B6R4, ECO:0000269|PubMed:15618416, ECO:0000269|PubMed:19199048}. |
| UniProt | INDUCTION: Induced by abscisic acid (ABA) in aleurone cells, embryos, roots and leaves (PubMed:25110688). Slightly down-regulated by gibberellic acid (GA) (By similarity). Accumulates in response to jasmonic acid (MeJA) (PubMed:16919842). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000269|PubMed:16919842, ECO:0000269|PubMed:25110688}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | DQ298184 | 0.0 | DQ298184.1 Oryza sativa (japonica cultivar-group) WRKY transcription factor 70 mRNA, complete cds. |
| Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Zhang ZL, et al.
A negative regulator encoded by a rice WRKY gene represses both abscisic acid and gibberellins signaling in aleurone cells.
Plant Mol. Biol., 2009. 70(1-2): p. 139-51
[PMID:19199048] - Basu S,Roychoudhury A
Expression profiling of abiotic stress-inducible genes in response to multiple stresses in rice (Oryza sativa L.) varieties with contrasting level of stress tolerance.
Biomed Res Int, 2014. 2014: p. 706890
[PMID:25110688] - Zhang L, et al.
Three WRKY transcription factors additively repress abscisic acid and gibberellin signaling in aleurone cells.
Plant Sci., 2015. 236: p. 214-22
[PMID:26025535]
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