 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
OPUNC05G16320.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
MYB |
Protein Properties |
Length: 316aa MW: 34230.5 Da PI: 7.16 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC05G16320.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 24.3 | 7.5e-08 | 40 | 84 | 2 | 44 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
g+W++eE + + +a + l + +W+++a ++ g+t ++ ++
OPUNC05G16320.1 40 GAWSQEENKVFEQALAALDRNdpeRWERVALLLP-GKTVADVMTHY 84
79*****************99*************.********999 PP
|
2 | Myb_DNA-binding | 45.6 | 1.6e-14 | 155 | 199 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT+eE++l++ + k++G g+W+ I+r + + Rt+ q+ s+ qky
OPUNC05G16320.1 155 PWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKY 199
8*******************************************9 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 316 aa
Download sequence Send
to blast |
MMKESYMEVL PPAPAHYFVG QAAAAAAAGG WFLQDRRGGG AWSQEENKVF EQALAALDRN 60 DPERWERVAL LLPGKTVADV MTHYDDLEND VCFIEAGLVP FPHYGAGVGG SPPSGFTLDW 120 DGGDDPAGLG FKRSCYMVGG KRARGPDQER KKGVPWTEEE HKLFLMGLKK YGRGDWRNIS 180 RNFVTSRTPT QVASHAQKYF IRLNSGGKDK RRSSIHDITT VNLPDDDHGN PSPSPPSVLT 240 AHSSAAAGGP VISEQFGVLV DSKPPPPLGR GGGHHFMPHP YAQVKIEARN SHVAGGGRLD 300 DSVLLQMQCG QLQPLG
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Involved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AK068138 | 0.0 | AK068138.1 Oryza sativa Japonica Group cDNA clone:J013135D01, full insert sequence. |