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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC05G02430.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
WRKY |
Protein Properties |
Length: 500aa MW: 52582.6 Da PI: 6.4103 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC05G02430.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 94.8 | 5.9e-30 | 245 | 303 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+Dg++WrKYGqK+ kg+++pr+YYrCt++ +Cpv+k+v+r+a+d++++++tYeg+H h+
OPUNC05G02430.1 245 SDGCQWRKYGQKMAKGNPCPRAYYRCTMSsQCPVRKQVQRCADDKTILITTYEGTHSHP 303
7***************************99****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 500 aa
Download sequence Send
to blast |
MEMMVQKQRH EEEEEERGLL IGREIKEVDF FSVAAAGGGR DDDDGGAVVL RADGISSHAG 60 FMVSTALDLL TAVNDGDHEE KRGESNDHQS KMDAAAATMV EGELRQAGEE NRRLRRRLEE 120 LTTSYGALYH QLVQAQQLQT KQQEAMASVQ LLDALAESPA SHRRRAAPTT ALDGDRTDSD 180 GGDADENNFS PSLGSKRPAT LSRLTPERDG GENNAGGEQA AVAEMAPCRK ARVSVRARSE 240 APMISDGCQW RKYGQKMAKG NPCPRAYYRC TMSSQCPVRK QVQRCADDKT ILITTYEGTH 300 SHPLPPAAAA MAKTTSAAAA MLLSGPAVSR DALFGHHVAA PPLFHHPYGG SVATTMATLS 360 ASAPFPTITL DLTQPPPTTT TAGGGMLHRP HAFPSLPFSM YGGFQGSHRP VVLPPPPPPP 420 SMGARERSVV ETMTAAITRD PNFTTALAAA LSSIMAGGAQ AQTPPRGGSA ATGEAAGDIN 480 DGGGADHATA GARAAATSST
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012613 | 1e-113 | CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence. |