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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC05G01820.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
Trihelix |
Protein Properties |
Length: 336aa MW: 37580.6 Da PI: 6.3702 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC05G01820.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 63.9 | 3.7e-20 | 55 | 119 | 1 | 65 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkik 65
+W++ e+ a +++r ++++++ ++k++k+lWe+ s+++++ gf+r+p qCk+kw+nl +r+k ++
OPUNC05G01820.1 55 QWSHAETSAFLAIRADLDHSFLSTKRNKALWEAASARLQALGFSRTPDQCKSKWKNLVTRFKGTE 119
7*************************************************************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 336 aa
Download sequence Send
to blast |
MDPFHHLNSS FSNPYHPLLA SPPHHFAPDP LPPPPPPPPP PPADPPSFER ERLPQWSHAE 60 TSAFLAIRAD LDHSFLSTKR NKALWEAASA RLQALGFSRT PDQCKSKWKN LVTRFKGTEG 120 AAAAVVAGTD QMQGGGGGAA VRGSSTSSSS SSFPFHDELR RIFDARVERA RALERKKVKG 180 KDPDDDGEGD EDDDEEGEQV DEEDDGAASG DTTRAGSKKR RRKAAAAATA RRTGSAGGVE 240 GEVEAMLREF MRRQIEMEER WMEAAEAREA ERRAREEEWR TAMVALGEER LALVRRWRER 300 EDAWRARAEE REERRHQLDD ALLRSARNAR PIHLLC
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC130598 | 0.0 | AC130598.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OSJNBa0056I11, complete sequence. |
GenBank | AP014961 | 0.0 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |