 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC05G01690.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 160aa MW: 17475.4 Da PI: 4.6347 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC05G01690.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 45.8 | 1.2e-14 | 23 | 67 | 16 | 59 |
TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 16 kgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
k+ e+ +YY+C+s gCp++k+v+++++d ++++itY+++Hnh+
OPUNC05G01690.1 23 KNREMILGYYKCSSYrGCPARKQVDKCRNDASLLIITYTSDHNHD 67
66777889****9877****************************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 160 aa
Download sequence Send
to blast |
MACSRCIQKS GPYSMAKPHM DSKNREMILG YYKCSSYRGC PARKQVDKCR NDASLLIITY 60
TSDHNHDNYA ATATITTTTT TTNSVQQQAH NPDRSDAGDA LSNGMSLAEV VTVASSELSS 120
EEESCDIFDE LEELPVSASP LPSLSFMVQE SSFSDARTLL
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AC130598 | 1e-87 | AC130598.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OSJNBa0056I11, complete sequence. |
| GenBank | AK241799 | 1e-87 | AK241799.1 Oryza sativa Japonica Group cDNA, clone: J065208G18, full insert sequence. |
| GenBank | AK288062 | 1e-87 | AK288062.1 Oryza sativa Japonica Group cDNA, clone: J075154N16, full insert sequence. |
| GenBank | AP014961 | 1e-87 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012613 | 1e-87 | CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence. |
