 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OPUNC05G01220.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WOX |
| Protein Properties |
Length: 292aa MW: 30336.2 Da PI: 8.2373 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC05G01220.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 62.8 | 5.2e-20 | 25 | 84 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
+R+++t+eql +Lee+++ r+p+a+++++++++l +++ ++V++WFqN++a++++
OPUNC05G01220.1 25 TRWCPTAEQLMILEEMYRGgLRTPNAAQIQQITAHLssygRIEGKNVFYWFQNHKARDRQ 84
8*****************99*************************************996 PP
|
| 2 | Wus_type_Homeobox | 119 | 2.1e-38 | 23 | 85 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
++tRW+Pt+eQ++iLee+y+ GlrtPn+++iq+ita+L++yG+ie+kNVfyWFQN+kaR+rqk
OPUNC05G01220.1 23 STTRWCPTAEQLMILEEMYRGGLRTPNAAQIQQITAHLSSYGRIEGKNVFYWFQNHKARDRQK 85
579***********************************************************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 292 aa
Download sequence Send
to blast |
MAPAVQQQQS GGGGGGSTAA VGSTTRWCPT AEQLMILEEM YRGGLRTPNA AQIQQITAHL 60
SSYGRIEGKN VFYWFQNHKA RDRQKLRRRL CISHHLLSCA HYYAAAHAHH HLALSPTAAA 120
VPPPLLAPLH SSSSYPASSC GGALDHPNSL LSPTSATTPA AAAAAAAAAA AAAYNTTSFY 180
YPLAASAQPP PRTSPASPLF HYNQGGGGVV LPAAEAIGRS SDYSLGKLVD NFGVALEEAF 240
PPQLQPPATT TTMTMTAVVD TAAAAAGGGF CRPLKTLDLF PGGLKEEQHD VV
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC078977 | 1e-122 | AC078977.6 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone P0496H07, complete sequence. |
| GenBank | AM490244 | 1e-122 | AM490244.1 Oryza sativa mRNA for putative wuschel homeobox protein (wox3 gene). |
| GenBank | AP014961 | 1e-122 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012613 | 1e-122 | CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence. |
