 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC05G00830.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
Dof |
| Protein Properties |
Length: 347aa MW: 36060.3 Da PI: 8.5752 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC05G00830.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 118.2 | 3.1e-37 | 95 | 153 | 3 | 61 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
e lkcprCdstntkfCy+nnyslsqPr+fC+aCrryWt+GGalrnvPvGgg r++ k+
OPUNC05G00830.1 95 EPGLKCPRCDSTNTKFCYFNNYSLSQPRHFCRACRRYWTRGGALRNVPVGGGYRRHAKR 153
56789************************************************998765 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009640 | Biological Process | photomorphogenesis |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 347 aa
Download sequence Send
to blast |
MIFPPAFLDS SSWNDNNNQQ QQQQQQQQHA HGHHQHHQVA AGCGGGGGGD GNSHELMQQS 60
MMPGTLPDGG GGAVGPAKPM SMSERARLAR IPLPEPGLKC PRCDSTNTKF CYFNNYSLSQ 120
PRHFCRACRR YWTRGGALRN VPVGGGYRRH AKRAKPKAAS AAAAAAAVAG SSAATTTAGS 180
TPAGSTTSST CTTANAPALP AMLGGNLSIL PPLLRLADFD AMSLGSTFSG MAGKPPVDAA 240
GCYSIGGATA ATGLEQWRLQ QMQSFPFFHA MDHQAAMATP PAMAMPGMFQ LGLDGDGHGG 300
GEDGGELHHA MPSKREAGGY PRGMYGDHHL AGGYTSYSSA TTGNHLL
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK108933 | 1e-175 | AK108933.1 Oryza sativa Japonica Group cDNA clone:002-153-A09, full insert sequence. |
