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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC04G26480.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 265aa MW: 28862.2 Da PI: 11.2081 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC04G26480.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 24.1 | 8.9e-08 | 110 | 134 | 1 | 26 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng 26
++y+GVr ++ +gr++AeIrdp ++
OPUNC04G26480.1 110 PRYRGVRKRP-WGRFAAEIRDPAKRA 134
68********.**********96543 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MDCDEEKRTR GGGGSGEGGK RLPKAIPSPR VASHHATPPP PSSTPYPLSP RSQIRRISAQ 60 LNSAAAAAQV LNPSRVAAQR RGEPRFSEEE VFVDFVYMVG GEIMCDAAAP RYRGVRKRPW 120 GRFAAEIRDP AKRARLSSKW YSVPNSPMRD DVTYLHVIAE LWIGTHPSTP SSLLADSLLR 180 DWLRVQLHRA RPRRRYSLGR RPPIPHHAML SASAPFSTII LNLTQTPPGE AGIGAGAVGL 240 LHALHCPPVI HPGVAAKVMP FAVSP
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HQ827834 | 0.0 | HQ827834.1 Oryza punctata isolate BB Shattering4 gene locus, complete sequence. |