 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC04G26040.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WOX |
| Protein Properties |
Length: 291aa MW: 30820.3 Da PI: 8.3215 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC04G26040.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 59.8 | 4.4e-19 | 35 | 95 | 3 | 57 |
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
+R+t+t+eq+++L el+++ r p+ e+++++A+ l +++ ++V++WFqN++a+e++
OPUNC04G26040.1 35 TRWTPTTEQIKILRELYYScgIRSPNSEQIQRIAAMLrqygRIEGKNVFYWFQNHKARERQ 95
7*****************7668*************************************97 PP
|
| 2 | Wus_type_Homeobox | 114.6 | 4.8e-37 | 34 | 97 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
tRWtPt+eQikiL+ely+ +G+r+Pn+e+iqri+a+L++yG+ie+kNVfyWFQN+kaRerqk+
OPUNC04G26040.1 34 GTRWTPTTEQIKILRELYYsCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQKK 97
69***************9978*****************************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 291 aa
Download sequence Send
to blast |
MDHMQQQQRQ QLGGGGGEEV AGRGGGVPVC RASGTRWTPT TEQIKILREL YYSCGIRSPN 60
SEQIQRIAAM LRQYGRIEGK NVFYWFQNHK ARERQKKRLT TLDVTTTAAA AAGGGDASHL 120
AILSLSPTAG AAAPSSPGFY IGNGGVVQTD QASVNWDCTA MATERTLLQD YMGVRGASAA 180
ATPTPWAMAT TREPETLPLF PVVVGVGGGD GTLHGGQERG GFPSNFQRWG SAAAAATTNT 240
ITVQQHHQLL QQHNFYSGSS QLLPSQDGAA GTSLELTLSS SYCSPYPAGS M
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription repressor required for the formation and development of tiller buds and panicles (PubMed:25697101). Required for tiller formation and female sterility (PubMed:27194802). Required for the early developmental stages of axillary meristem formation (PubMed:25841039). Plays a role in maintaining the axillary premeristem zone and in promoting the formation of the axillary meristem by promoting OSH1 expression (PubMed:25841039). Does not seem to be involved in maintenance of the shoot apical meristem (SAM) (PubMed:25841039). {ECO:0000269|PubMed:25697101, ECO:0000269|PubMed:25841039, ECO:0000269|PubMed:27194802}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Induced by the cytokinin 6-benzylaminopurine. {ECO:0000269|PubMed:17351053}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AB218894 | 0.0 | AB218894.1 Oryza sativa Japonica Group mRNA for OsWUS protein, complete cds. |
