 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OPUNC04G24950.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WOX |
| Protein Properties |
Length: 254aa MW: 28189.3 Da PI: 9.878 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC04G24950.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 60.7 | 2.3e-19 | 109 | 168 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
+R+++++eq+++Le l++ r+p+ ++e+++++l +++ ++V++WFqN++a+e++
OPUNC04G24950.1 109 TRWNPSAEQIKVLEMLYRGgMRTPNSVQIERITEELgkygRIEGKNVFYWFQNHKARERQ 168
8*****************99**************************************97 PP
|
| 2 | Wus_type_Homeobox | 115.7 | 2.3e-37 | 108 | 170 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
+tRW+P++eQik+Le+ly+ G+rtPn+ +i+rit+eL +yG+ie+kNVfyWFQN+kaRerqkq
OPUNC04G24950.1 108 TTRWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQKQ 170
79***********************************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 254 aa
Download sequence Send
to blast |
MRLHHLHVAY LDHKTSSSSS SPAPASISPS ITGSAFPAFS FKCLRPLAPK ISLPEPRKMI 60
APPDFIVPRA RNASKLLNYT VRHQTLLVLF TLNYTRSIDQ VQVPATGTTR WNPSAEQIKV 120
LEMLYRGGMR TPNSVQIERI TEELGKYGRI EGKNVFYWFQ NHKARERQKQ KRAALLTLST 180
LDSSLLPATA NETKEAPEKK EKEVDEGLAS CKRRCKAWGD GAGHGDAVVA TEAADCTVDD 240
VTLELFPLHP QGKA
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
| UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | JF836159 | 0.0 | JF836159.1 Oryza sativa Japonica Group WUSCHEL-like homeobox protein (WOX4) mRNA, complete cds. |
