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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC04G18520.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 244aa MW: 26269 Da PI: 4.5295 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC04G18520.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.1 | 2.6e-19 | 60 | 109 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr ++ +g+Wv+eIr+p++ + r++lg+f+tae+Aa+a++ a+++++g
OPUNC04G18520.1 60 TYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFDTAEMAARAHDVAALAIKG 109
69****998.**********843...6***********************9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 244 aa
Download sequence Send
to blast |
MEQEQVMSQE SNSCTCSSSS NDASSAAYSS LNASSPSSVD SRSAGGKKKR PRSDQLKHPT 60 YRGVRMRSWG KWVSEIREPR KKSRIWLGTF DTAEMAARAH DVAALAIKGR AAHLNFPDLA 120 GELPRAASAS PKDVQAAAAL AAATASPALS PSPCHDDVDA TADDEPESAE IEKTTAPVCV 180 VENGTLQQDG GIGLEYTYFT MPDALLEFGF TLPPPPPPQY YCGSPWDDDA DDFFFGEPLV 240 LWEH
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP014960 | 0.0 | AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence. |