|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
OPUNC04G18500.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
ERF |
Protein Properties |
Length: 286aa MW: 29975.7 Da PI: 5.3951 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC04G18500.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.7 | 3.5e-19 | 120 | 170 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ y+GVr+++ +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a+++++g
OPUNC04G18500.1 120 PSYRGVRRRS-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALAIKG 170
57*****887.**********843...6***********************9987 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 286 aa
Download sequence Send
to blast |
MEADASHTPT TSSSVSVSFS SSSLSTSSST SSLIDNGAQE RSKSSKPKHA AKKRKRAGGE 60 SPPPATEEPT NAAHGAGEDT SSCSTDDNAA ASGKAQAGGG VDSSSTCTAA SAPRSGFKHP 120 SYRGVRRRSW GKWVSEIREP RKKSRIWLGT FPTAEMAARA HDVAALAIKG RNAHLNFPDS 180 AHELPRPAST SPADIQAAAA KAAAEVRCEE ETSPSSPTAE QREETACPDT VHADGGQDNA 240 LFDLPDLLLD LRDGLWWSPV WPAALAAEEY DGGDAVVLNE PLLWAE
|
Nucleic Localization
Signal ? help
Back to Top |
|
No. |
Start |
End |
Sequence |
1 | 46 | 54 | PKHAAKKRK |
2 | 50 | 56 | AKKRKRA |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | KM576143 | 0.0 | KM576143.1 Oryza sativa Indica Group cultivar HRC300 dehydration responsive element binding protein 4-2 (DREB4-2) gene, complete cds. |