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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC04G18320.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 335aa MW: 35826.7 Da PI: 4.8042 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC04G18320.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.9 | 6.9e-20 | 148 | 199 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+y+GVr+++ +g+++AeIrdp+ +g r++lg+++t+ eAa+a+++a+ +++g+
OPUNC04G18320.1 148 KYRGVRQRP-WGKFAAEIRDPKRRG--SRVWLGTYDTPVEAARAYDRAAFRMRGA 199
8********.**********96554..**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009409 | Biological Process | response to cold |
GO:0010200 | Biological Process | response to chitin |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 335 aa
Download sequence Send
to blast |
MDFHHGDADD FALEFIREHL LGVDGATTVT EPADLEVSDD ATFPVPPPPV AGLEAAYPPM 60 FLHGQRQQEQ HGCHVELTHE HVESAPAAEA AAYRAAPEQP VAEVMIKFGG EPSPVRPSSL 120 TISLPPSSFG SWASAAAAAT AAVDDFRKYR GVRQRPWGKF AAEIRDPKRR GSRVWLGTYD 180 TPVEAARAYD RAAFRMRGAK AILNFPNEVG TRGAELWAPP QPQTAAATTN KRKWQPSEDP 240 DDDDVEVIGV VSKAVKTEAP TSNSSSLSSS LTSRETTPAT SSTGTEAAGS AAESLPATPS 300 SWSWEQYWEA LLGGLPPLSP VSPHPALGFP QLTVN
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK109141 | 0.0 | AK109141.1 Oryza sativa Japonica Group cDNA clone:002-155-E09, full insert sequence. |
GenBank | AL607006 | 0.0 | AL607006.4 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence. |
GenBank | AL731613 | 0.0 | AL731613.5 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065H10, complete sequence. |
GenBank | AP014960 | 0.0 | AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence. |
GenBank | AY339379 | 0.0 | AY339379.1 Oryza sativa (japonica cultivar-group) Ap26 mRNA, complete cds. |