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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC04G09190.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 283aa MW: 29126.8 Da PI: 4.3477 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC04G09190.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.6 | 1.5e-18 | 47 | 98 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
++y GVr+++ +gr++AeIrdp + + r++lg+f+taeeAa a+++a+++l+g+
OPUNC04G09190.1 47 TRYLGVRRRP-WGRYAAEIRDPAT---KERHWLGTFDTAEEAAVAYDRAARSLRGA 98
5799******.**********843...4*************************995 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009739 | Biological Process | response to gibberellin |
GO:0010030 | Biological Process | positive regulation of seed germination |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 283 aa
Download sequence Send
to blast |
MMNFSSYFYS SSTAVAAAGG GGGEKKSSSA SASKKKQQAA AGEGNQTRYL GVRRRPWGRY 60 AAEIRDPATK ERHWLGTFDT AEEAAVAYDR AARSLRGARA RTNFAYPDLP PGSSITPYLS 120 PDLTADGSDQ LLQPFYANPS AAAAAALPTP AAAVAGGVEF GSEYMSMYGG VDMSSLMDDI 180 PMPDDLPPTM TGGDDYSSGG SGGGMVDVTM YGGGNGGSGG GWCDASDFTS YSSSSPAPAA 240 AGSHGMYFEE GYVHSPLFSP MPAVDDAGAD GFQLGGSSSS YYY
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AL731642 | 0.0 | AL731642.3 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0014D23, complete sequence. |
GenBank | AP014960 | 0.0 | AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence. |