 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC04G05220.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 328aa MW: 34573.2 Da PI: 10.4623 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC04G05220.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 97.7 | 7.3e-31 | 250 | 308 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D ++WrKYGqK++kgs+fpr+YY+C++ gCp++k+ver+ dp+++++tYegeH+h+
OPUNC04G05220.1 250 ADDFSWRKYGQKPIKGSPFPRGYYKCSTLrGCPARKHVERDPADPSMLIVTYEGEHRHT 308
699***********************9988****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
| GO:0010200 | Biological Process | response to chitin |
| GO:0042742 | Biological Process | defense response to bacterium |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005516 | Molecular Function | calmodulin binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:1990841 | Molecular Function | promoter-specific chromatin binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MITMDLMSGY GRVDEQVAIQ EAAAAGLRGM EHLILQLSQT GTSERSPAPA PAQEQKQQVD 60
CREITDMTVS KFKKVISMLN RTGHARFRRG PVVAQSSGPA ASEPAPVRSS PSAVSRPMTL 120
DFTKAASGYS KDAGFSVSGI SAASSSFLSS VTGDGSVSNG RGGGSSSLML RPPPATSCGK 180
PPLSSAAPAA VSAGVGHKRK CHDHAHSENV AGGKYGSTGG RCHCSKRRKH RVKRTIRVPA 240
ISSKVADIPA DDFSWRKYGQ KPIKGSPFPR GYYKCSTLRG CPARKHVERD PADPSMLIVT 300
YEGEHRHTPA AGQDQPPAPP PPLALPLA
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor. Interacts, when in complex with WRKY71, specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Represses specifically gibberellic acid (GA)-induced promoters in aleurone cells, probably by interfering with GAM1. {ECO:0000250|UniProtKB:Q0JEE2}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Induced by abscisic acid (ABA) in aleurone cells (By similarity) (PubMed:15618416). Accumulates in response to uniconazole, a gibberellic acid (GA) biosynthesis inhibitor (By similarity). Repressed by GA (PubMed:15618416). {ECO:0000250|UniProtKB:Q0JEE2, ECO:0000269|PubMed:15618416}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK100954 | 0.0 | AK100954.1 Oryza sativa Japonica Group cDNA clone:J023139N16, full insert sequence. |
