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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC03G38860.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 197aa MW: 21276.9 Da PI: 9.0856 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC03G38860.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 56.2 | 8.5e-18 | 63 | 112 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++GVr ++ +g+++AeIrd + ng r++lg+f++ae Aa a+++a+ +++g
OPUNC03G38860.1 63 FRGVRKRP-WGKFAAEIRDSTRNG--VRVWLGTFDSAEAAALAYDQAAFAMRG 112
79******.**********44465..*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0006952 | Biological Process | defense response |
GO:0009873 | Biological Process | ethylene-activated signaling pathway |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 197 aa
Download sequence Send
to blast |
MSPPPHPHVD GSARLTAGLI NFLESRRAGA GTMTTTNRLP APAPIDVQDD SSPPVQQQQQ 60 QAFRGVRKRP WGKFAAEIRD STRNGVRVWL GTFDSAEAAA LAYDQAAFAM RGSAAVLNFP 120 MEQVRRSMDV SSLLQEGASP VVALKRRHSM RAAAGRRKSG GRAEAEVMEL EDLGAEYLEE 180 LLAASQSESP STSHHSI
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds to the GCC-box cis-acting elements found in the promoter regions of ethylene-responsive genes (PubMed:23057995). Acts downstream of MYC2 in the jasmonate-mediated response to Botrytis cinerea infection (PubMed:28733419). With MYC2 forms a transcription module that regulates pathogen-responsive genes (PubMed:28733419). {ECO:0000269|PubMed:23057995, ECO:0000269|PubMed:28733419}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by wounding and infection with the fungal pathogen Botrytis cinerea. {ECO:0000269|PubMed:28733419}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC092263 | 1e-130 | AC092263.7 Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete sequence. |
GenBank | AK109390 | 1e-130 | AK109390.2 Oryza sativa Japonica Group cDNA clone:006-211-G07, full insert sequence. |
GenBank | AP014959 | 1e-130 | AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. |