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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC03G37590.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
NAC |
Protein Properties |
Length: 327aa MW: 35350 Da PI: 4.3076 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC03G37590.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 68.3 | 2.1e-21 | 9 | 152 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkya..tgkrknratk....sgy 82
l pG+ FhP+d+ l++ +L+++++++++e + i+++d+y+++P +L ++++++ wyfF++ + +++ t+ r++ra+ +++
OPUNC03G37590.1 9 LEPGYAFHPSDDGLITLFLRPNIAQTPFED-RLINHADVYSADPAELVGehkpapGTQGGSSVWYFFCSPRYTSKrkTSGRRQRAIGcgggESV 101
579************************999.89**************733567665666788******98766651245567776555545778 PP
NAM 83 WkatgkdkevlskkgelvglkktLvfy.....kgrapkgektdWvmheyrl 128
Wk+ g +k+v ++g+ vg + + + +g+a++ ++ W+m ey l
OPUNC03G37590.1 102 WKSEGGKKAVNGADGRRVGYLQKFSYGvyessSGSARTFTRLGWCMTEYGL 152
********************999999655776788999999********76 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MDDDGEIALE PGYAFHPSDD GLITLFLRPN IAQTPFEDRL INHADVYSAD PAELVGEHKP 60 APGTQGGSSV WYFFCSPRYT SKRKTSGRRQ RAIGCGGGES VWKSEGGKKA VNGADGRRVG 120 YLQKFSYGVY ESSSGSARTF TRLGWCMTEY GLDDAIDDGA DKQVLCKVYR SPRAVCAEAR 180 TAAAKSADSS CSGSKRKADD GGVDHLEEAP PSARPRQEAA RSEHDEQPEL LPELNLDALL 240 SSAPMDDNLG VEFGTATTED YMRYLLNDEP LPWAPTMEVV DGGDGGGEEF ILTANGPCME 300 DEIIERLAAG ETLDYILGKD PGEQVFA
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012611 | 0.0 | CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence. |