PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC03G32620.1

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 184aa MW: 20280.9 Da PI: 11.2593

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC03G32620.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	41.8	2.3e-13	62	111	1	50
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 e+e++r+rrk +NR++ArrsR+RK++++eeL+e ++ L aeN++L+ +l OPUNC03G32620.1 62 EEERRRQRRKVSNRLSARRSRARKQQRLEELREASARLRAENRELAGRLH 111 7899****************************************997765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.0E-8	57	111	No hit	No description
SMART	SM00338	3.6E-7	61	126	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	5.2E-9	62	111	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.599	64	115	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	6.41E-8	66	113	No hit	No description
PROSITE pattern	PS00036	0	69	84	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 184 aa Download sequence Send to blast
MLSVQEALDF DLDAMTSGFG FTPWAADTCP TLEQLMAASS SSSPSSWLDD NAAAAEEEND 60 EEEERRRQRR KVSNRLSARR SRARKQQRLE ELREASARLR AENRELAGRL HAVARHDLAA 120 RCQNARLRAE AAALARRLRD ARRLLALQRL ARGRHMITAP LASPPPPPPP SAPAAAAVLA 180 SLMA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	78	85	RRSRARKQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AC107207	1e-173	AC107207.9 Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence.
GenBank	AC133450	1e-173	AC133450.6 Oryza sativa chromosome 3 BAC OSJNBa0072F13 genomic sequence, complete sequence.
GenBank	AP014959	1e-173	AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002466386.1	2e-44	DNA-binding protein EMBP-1
TrEMBL	A0A0E0KJI7	1e-122	A0A0E0KJI7_ORYPU; Uncharacterized protein
STRING	OPUNC03G32620.1	1e-123	(Oryza punctata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13845	24	29