 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC03G31970.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
bHLH |
Protein Properties |
Length: 316aa MW: 33147.3 Da PI: 8.3601 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC03G31970.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 18.1 | 4.9e-06 | 152 | 198 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
++ n+r r RR+r+ +++ L++l+ + +K + a++L +A YI+ L
OPUNC03G31970.1 152 TTTNKRPRVRRERLGERIIALQQLVSPF-----GKSDTASVLHEALGYIRFL 198
678************************8.....8****************98 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 316 aa
Download sequence Send
to blast |
MVKEEEIITE AAGARGYMEM LGLGDEAADY LMCLSPSSYL SSPAASTTTA VASPTCASYM 60 APHPYHHLLS FSGQDQYHGD DVFGFQYYGG DHVIPAVVPQ KSSPTTECSS SVSSMSSSPT 120 ATAISSSKSP ASKKKGSRGC DQRKATAPAA ATTTNKRPRV RRERLGERII ALQQLVSPFG 180 KSDTASVLHE ALGYIRFLHD QVQVLSSPYL QRLPPSARVP EQERSAAGVV VAAAEEQPPA 240 LRPSDLRSRG LCLVPISCTE HVAGGNGNGN GADLWSVAAG MAKATTTVTA AVERSKKAAA 300 ATAALLRGDR PGQQLA
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK072833 | 0.0 | AK072833.1 Oryza sativa Japonica Group cDNA clone:J023136C11, full insert sequence. |