PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC03G31920.2
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 953aa    MW: 103475 Da    PI: 7.5536
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC03G31920.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.11.8e-28712768259
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      +DgynWrKYGqK+ k++e prsYY+Ct  gC+vkk vers+ d+ + eitY+g+Hnh+
  OPUNC03G31920.2 712 KDGYNWRKYGQKQLKDAESPRSYYKCTRDGCTVKKIVERSS-DGCIKEITYKGRHNHP 768
                      8****************************************.***************8 PP
2WRKY101.93.7e-32848906159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDgy+WrKYGqK+vkg++ prsYY+Ct  gC+v+k++er++ dpk+v +tY+g+Hnh+
  OPUNC03G31920.2 848 LDDGYRWRKYGQKVVKGNPRPRSYYKCTADGCNVRKQIERASADPKCVLTTYTGRHNHD 906
                      59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF508146.32E-2161156IPR011038Calycin-like
Gene3DG3DSA:2.40.128.201.9E-3167240IPR012674Calycin
PfamPF122049.6E-1571392IPR022017Domain of unknown function DUF3598
SuperFamilySSF508146.32E-21183240IPR011038Calycin-like
SuperFamilySSF508141.53E-28256397IPR011038Calycin-like
Gene3DG3DSA:2.40.128.207.9E-42257397IPR012674Calycin
Gene3DG3DSA:2.20.25.803.4E-26704770IPR003657WRKY domain
PROSITE profilePS5081122.986706770IPR003657WRKY domain
SuperFamilySSF1182907.59E-23709770IPR003657WRKY domain
SMARTSM007748.7E-31711769IPR003657WRKY domain
PfamPF031062.2E-21712768IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.1E-34833908IPR003657WRKY domain
SuperFamilySSF1182901.44E-27840908IPR003657WRKY domain
PROSITE profilePS5081136.059843908IPR003657WRKY domain
SMARTSM007744.4E-36848907IPR003657WRKY domain
PfamPF031066.8E-24849906IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 953 aa     Download sequence    Send to blast
MAEALVAGLR LPASAVARPR IRSRHHGSCA ARVPCLSRGR LCARAAVAGP PEVDDDDAMT  60
IDNLRRFFDV NVGKWNGAFY QFDAHGKVLQ GISTRLSVST YGEDDLISLL QSLYIKQASS  120
QISFVDEEDS EEWVEYKIKE TNMFTADKYQ QIGFFHEEKA FALRYQTAGM LETVLRAGVL  180
GEDDTGEESP KNLKIPSRKP SIVCENCLYS LEGNGRVRAF HIMDPKGVLD MLIIFHEKQG  240
SEVPLIYSSD DADITNDDRI SPLLGRWEGR SVTKRSGVYG ATLSEADTVV LLEKDRSGQL  300
ILDNMSTKSG TSTTTTVHWT GSANNNLLQF DGGYEMTLLP GGMYMGYPSD IGKIVNDLDS  360
FHLEFCWMES PGKRQRLVRT YDSAGLAVSS TYFFETKRLS TSSSSSPCRR PLPSHGRRPD  420
LSNAIVSPVK EKAAIAFDAG GGGCCCRDRS SKVTGGRRRL LLLKPLERVS PIPTHLSLIP  480
LLVGSRRCHR ERCHCTFSFV CRLVEARKLR RVAAMADRRR GGDDGVHQPP FTSTGQERVF  540
DGGGGGGVPG QVAPYGSDFD QSSYMALLAA GAVGVQPTTA PWAVEEDVAA APLGISLAPQ  600
FSMANYAPPP SYQHPATLVS PPLAAGLHPY PPYLHGVDAP PPQWPPRPAP SSSSLQPPPP  660
NFTVLTAAAP PHDQHHSMQQ LFLRAAAFGG GGGGMQAAAA PPTTTTIEQP AKDGYNWRKY  720
GQKQLKDAES PRSYYKCTRD GCTVKKIVER SSDGCIKEIT YKGRHNHPRP LEPRRGGSSS  780
SGMGAMAAGD HNADAVVEED DPSDDETLHE DDDGEEEGHD RGADGEVGQR VVRKPKIILQ  840
TRSEVDLLDD GYRWRKYGQK VVKGNPRPRS YYKCTADGCN VRKQIERASA DPKCVLTTYT  900
GRHNHDPPGR PAGAATAAAA NLQMPGPAAM SLAGGGTAHQ QPSGGARQMK EET
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5yvf_A1e-1505639715356BFA1
5yvf_B1e-1505639715356BFA1
5yvf_C1e-1505639715356BFA1
5yvf_D1e-1505639715356BFA1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2879070.0AK287907.1 Oryza sativa Japonica Group cDNA, clone: J065212K05, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0KJ930.0A0A0E0KJ93_ORYPU; Uncharacterized protein
STRINGOPUNC03G31920.20.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP28753236
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01080.16e-59WRKY DNA-binding protein 58