 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC03G31830.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 325aa MW: 33409.2 Da PI: 5.8153 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC03G31830.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 104.1 | 7.8e-33 | 138 | 195 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers++dp+vv++tYeg+H h+
OPUNC03G31830.1 138 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSDDPSVVITTYEGQHCHH 195
8******************************************************997 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009651 | Biological Process | response to salt stress |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 325 aa
Download sequence Send
to blast |
MAGAAGGREE GVGGGGGGGE WSPFDGDAFA EYSSAVLAEL GGWAAGGGMM MPALDLAEDV 60
MGTAAARSEE EAPARSGDGA AAASSSSSGE PTAPEIADKQ PAAAEAAPAA GATAKKGQKR 120
ARQPRFAFMT KSEIDHLEDG YRWRKYGQKA VKNSPFPRSY YRCTNSKCTV KKRVERSSDD 180
PSVVITTYEG QHCHHTASFQ RGVGGAAVAA HIHGAAAVAL AEQMSAFVSA PQPLAPPPPH 240
MLYSLPRLHP PSSSETVVSS MPTTSLQELN NGEGLQHPGY SPQAAVTIAQ PSPSPSSSVP 300
PAVSFDKGLL DDIVPPGTCL PTLDI
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AY341859 | 0.0 | AY341859.1 Oryza sativa (japonica cultivar-group) WRKY19 mRNA, complete cds. |
