 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OPUNC03G30830.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 387aa MW: 41974.8 Da PI: 10.5767 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC03G30830.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 99.1 | 2.7e-31 | 321 | 379 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D+++WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYeg+Hnh+
OPUNC03G30830.1 321 ADEFSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERCVDDPSMLIVTYEGDHNHN 379
69*************************988****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005516 | Molecular Function | calmodulin binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 387 aa
Download sequence Send
to blast |
MEGMEEANRE AVQSCHRVLT LLSSPHSQLV PNKDLAAVTG EAVAKFGSVA SRLNNGNGLQ 60
GHARVRKIKK PLPIFDSNLF LESPALAAAT AAKVSNPSPI TSLQLFPRYH QMEGSSSKDP 120
VRIPAQFPKR LLLDSPAVDS DGPSRGPPLQ LIQPVSVAPP AGTPHPALPS AHLHFIQQHQ 180
SYQRFQLMQQ MKMQSEMIKR SGLGEQGGSN GGGKGVNLKF DSSNCTASSS RSFLSSLSME 240
GSIASLDGSR SSRPFQLVSG SQTSSTPELG LMQRRRCTGR EDGSGRCTTG SRCHCAKKRK 300
LRIRRSIKVP AISNKVADIP ADEFSWRKYG QKPIKGSPHP RGYYKCSSVR GCPARKHVER 360
CVDDPSMLIV TYEGDHNHNR VLAVQPA
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK121838 | 0.0 | AK121838.1 Oryza sativa Japonica Group cDNA clone:J033100L17, full insert sequence. |
