 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OPUNC03G30420.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
GATA |
| Protein Properties |
Length: 270aa MW: 28822.4 Da PI: 6.9975 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC03G30420.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 47.8 | 2e-15 | 165 | 201 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35
C+nCg ++ Tp +Rrgp g+++LCnaCGl+++ kg+
OPUNC03G30420.1 165 CQNCGISSrlTPAMRRGPAGPRSLCNACGLMWANKGT 201
**********************************997 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005515 | Molecular Function | protein binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 270 aa
Download sequence Send
to blast |
MAAEPPADGR DPPADDGAAG DSGGGGAAEA LLSAASEQLT LVYQGEVYVF DPVPPQKVQA 60
VLLVLGGSDM PPGLVSMAVP STFDEKSTTV AARRVASLMR FREKRKERCF DKKIRYSVRK 120
EVAQKMKRRK GQFAGRADFG DGSCSSAPCG STANGEDDHI RETHCQNCGI SSRLTPAMRR 180
GPAGPRSLCN ACGLMWANKG TLRSPLNAPK MTAQHPADLS KMGDTDDSKS NLHAEHNQTT 240
TKTDSEMVPE QEQKADVLPP TKEEDSMATS
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250|UniProtKB:Q8LAU9}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By abscisic acid (ABA), and drought and salt stresses. Down-regulated by jasmonate and wounding. {ECO:0000269|PubMed:19618278}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK288076 | 0.0 | AK288076.1 Oryza sativa Japonica Group cDNA, clone: J075163P08, full insert sequence. |
