 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC03G23930.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
Dof |
| Protein Properties |
Length: 253aa MW: 25629.1 Da PI: 9.7103 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC03G23930.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 112.6 | 1.8e-35 | 51 | 105 | 5 | 59 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59
+cprC s++tkfCyynny++sqPr+fC+aCrryWt GG+lrnvP+Gg++rk+
OPUNC03G23930.1 51 REQCPRCASHDTKFCYYNNYNTSQPRHFCRACRRYWTLGGSLRNVPIGGSTRKRP 105
579*************************************************986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 253 aa
Download sequence Send
to blast |
MAPGALLLPP ASFKHHDVAA AAAAADSMQA CLQPLPPPAA ASGCNGSGGS REQCPRCASH 60
DTKFCYYNNY NTSQPRHFCR ACRRYWTLGG SLRNVPIGGS TRKRPRPPVR RPPVHFAAAA 120
AAPPPPPTSS QQAGLLGSLF ALGAAPLLEG RVGFDLGLGL PGPGHHVVAG GGAGEVAATG 180
LHGLGRGGPA AVATSSSAPL LWHTGLLDSS SNNVETWKMA AGGGAAMWPE FTAAAAQVGG 240
LMRGGAQQQP QLL
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC107206 | 1e-106 | AC107206.4 Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete sequence. |
| GenBank | AK119803 | 1e-106 | AK119803.1 Oryza sativa Japonica Group cDNA clone:002-176-F03, full insert sequence. |
| GenBank | AP014959 | 1e-106 | AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. |
