PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC03G21200.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family C2H2
Protein Properties Length: 428aa    MW: 44360.1 Da    PI: 7.809
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC03G21200.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.20.000557193123
                     EEETTTTEEESSHHHHHHHHHHT CS
          zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                     ++C+ Cgk F +   L  H ++H
  OPUNC03G21200.1 71 FRCTVCGKAFASYQALGGHKSSH 93
                     89**********99999999888 PP
2zf-C2H212.20.00055277299123
                      EEETTTTEEESSHHHHHHHHHHT CS
          zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                      ++C+ Cgk F +   L  H ++H
  OPUNC03G21200.1 277 FRCTVCGKAFASYQALGGHKSSH 299
                      89**********99999999888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.05E-56897No hitNo description
PfamPF139121.5E-127095IPR007087Zinc finger, C2H2
SMARTSM003550.0227193IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015712.0097198IPR007087Zinc finger, C2H2
PROSITE patternPS0002807393IPR007087Zinc finger, C2H2
SuperFamilySSF576672.2E-8130153No hitNo description
PROSITE profilePS501579.39131158IPR007087Zinc finger, C2H2
PfamPF139121.6E-10131154IPR007087Zinc finger, C2H2
SMARTSM003550.44131153IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280133153IPR007087Zinc finger, C2H2
SuperFamilySSF576672.2E-8272299No hitNo description
PfamPF139121.5E-12276301IPR007087Zinc finger, C2H2
SMARTSM003550.022277299IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015712.009277304IPR007087Zinc finger, C2H2
PROSITE patternPS000280279299IPR007087Zinc finger, C2H2
SuperFamilySSF576672.99E-5335362No hitNo description
PfamPF139121.6E-10337360IPR007087Zinc finger, C2H2
PROSITE profilePS501579.39337364IPR007087Zinc finger, C2H2
SMARTSM003550.44337359IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280339359IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MAAALQALLD PTALSLGLPT PAINKEDYLA ICLAALAGTR AGKALVGDQQ QVQAFKWLCP  60
APAPEPEELR FRCTVCGKAF ASYQALGGHK SSHRKPPPAG DHYAAAAAQQ VSAGGSEEDS  120
ASSAAGSTGP HRCTICRRSF ATGQALGGHK RCHYWDGTSV SVSVSASASA ASSAVRNFDL  180
NLMPLPESAA AAGMKRWAEE EEPTADMAAA LQALLDPTAL SLGLPTPAIN KEDYLAICLA  240
ALAGTRAGKA LVGDQQQVQA FKWLCPAPAP EPEELRFRCT VCGKAFASYQ ALGGHKSSHR  300
KPPPAGDHYA AAAAQQVSAG GSEEDSASSA AGSTGPHRCT ICRRSFATGQ ALGGHKRCHY  360
WDGTSVSVSV SASASAASSA VRNFDLNLMP LPESAAAAGM KRWAEEEEVQ SPLPVKKLRI  420
FTSALVLL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in abscisic acid (ABA) signaling. Required for the regulation of the cross-talk between NADPH oxidase, hydrogen peroxide and MAP kinase in ABA signaling. Regulates the expression of the NADPH oxidase genes RBOHB and RBOHE, and the MAPK genes MPK1, MPK4, MPK5, MPK7 and MPK14. Regulates ABA-induced hydrogen peroxide production and antioxidant defense. Required for tolerance to water stress and oxidative stress. {ECO:0000269|PubMed:25071223}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by abscisic acid (ABA) and hydrogen peroxide. {ECO:0000269|PubMed:25071223}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1068870.0AC106887.3 Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete sequence.
GenBankAC1478030.0AC147803.2 Oryza sativa chromosome 3 BAC OSJNBb0034P05 genomic sequence, complete sequence.
GenBankAK0598390.0AK059839.1 Oryza sativa Japonica Group cDNA clone:006-206-D03, full insert sequence.
GenBankAP0149590.0AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence.
GenBankCP0126110.0CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence.
GenBankCT8304150.0CT830415.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA104A19, full insert sequence.
GenBankHQ8588230.0HQ858823.1 Oryza sativa Japonica Group isolate UT1321 C2H2 transcription factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015629109.11e-107zinc finger protein 36-like
SwissprotQ75KE51e-108ZFP36_ORYSJ; Zinc finger protein 36
TrEMBLA0A0E0KFF40.0A0A0E0KFF4_ORYPU; Uncharacterized protein
STRINGOPUNC03G21200.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP34123273
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04340.13e-25zinc finger of Arabidopsis thaliana 6
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Yilmaz A, et al.
    GRASSIUS: a platform for comparative regulatory genomics across the grasses.
    Plant Physiol., 2009. 149(1): p. 171-80
    [PMID:18987217]
  3. Zhang H, et al.
    A novel rice C2H2-type zinc finger protein, ZFP36, is a key player involved in abscisic acid-induced antioxidant defence and oxidative stress tolerance in rice.
    J. Exp. Bot., 2014. 65(20): p. 5795-809
    [PMID:25071223]
  4. Li W, et al.
    A Natural Allele of a Transcription Factor in Rice Confers Broad-Spectrum Blast Resistance.
    Cell, 2017. 170(1): p. 114-126.e15
    [PMID:28666113]