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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC03G15890.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
WRKY |
Protein Properties |
Length: 335aa MW: 33714 Da PI: 4.5425 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC03G15890.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 30.9 | 5.3e-10 | 131 | 170 | 23 | 59 |
EEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 23 sYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
sYYrCt++ gC+++++ + ++ dp+ +itY geH+++
OPUNC03G15890.1 131 SYYRCTHKldqGCTATRQTQLCEADPSNYDITYYGEHTCR 170
9******9999***************************96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 335 aa
Download sequence Send
to blast |
MAFSSEGGVP AERVAAAVND LVEVREGLVR LRGFLPPLQA EQSSSSSPPP PCAELMDAMM 60 SKLMSAMAAL GGCGDIAGEV DAAGRWTSVA GSAHPMVVRQ AGESSAGRTR KRRGRSSTKR 120 VAATLDDGHV SYYRCTHKLD QGCTATRQTQ LCEADPSNYD ITYYGEHTCR NPSTIIPTAI 180 AYAGAAASDG PNNIISFGAT GGVASQLARE GTTTTASAAT QLSSSWGTSG GCGGDDVFSS 240 RREPFMQWEE LAAAVVHVRS AGVTSSTVGS ALAAENDGGN GDTAAGGGGG DGGGGGGDGG 300 GAGSFPSSPS TGSLGFVVGP LGSIEDVDDF FPFDP
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC231879 | 0.0 | AC231879.1 Oryza minuta clone OM__Ba0177M23, complete sequence. |
GenBank | AC231882 | 0.0 | AC231882.1 Oryza minuta clone OM__Ba0091G05, complete sequence. |